BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E12SP1|AL427341
(954 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig432 420 e-117
>3x_Contig432
Length = 1594
Score = 420 bits (211), Expect = e-117
Identities = 213/215 (99%)
Strand = Plus / Plus
Query: 740 tagctgagataaacgaggagagtccgtttcacctttcaaaaactgactcacacgctgtga 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagctgagataaacgaggagagtccgtttcacctttcaaaaactgactcacacgctgtga 60
Query: 800 gtyattataatccaagtaaccatcattcattagtgcctctagaagcattgccgatgatac 859
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcattataatccaagtaaccatcattcattagtgcctctagaagcattgccgatgatac 120
Query: 860 tgattctctcttgtcatctccattaccttcttgcaaaacagtaggagtytcaagcttgtt 919
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 tgattctctcttgtcatctccattaccttcttgcaaaacagtaggagtttcaagcttgtt 180
Query: 920 aacatcaagaacagactctcgtatacccttcacat 954
|||||||||||||||||||||||||||||||||||
Sbjct: 181 aacatcaagaacagactctcgtatacccttcacat 215
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6633
Number of Sequences: 1807
Number of extensions: 6633
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 954
length of database: 10,358,551
effective HSP length: 16
effective length of query: 938
effective length of database: 10,329,639
effective search space: 9689201382
effective search space used: 9689201382
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)